Index

A

adaptivemastermsm (module), [1] adaptivemastermsm.analyzer (module) adaptivemastermsm.analyzer.analyzer_lib (module) adaptivemastermsm.controller_lib (module) adaptivemastermsm.launcher (module), [1]

adaptivemastermsm.launcher.launcher (module), [1] adaptivemastermsm.launcher.launcher_lib (module), [1] adaptivemastermsm.system (module), [1] adaptivemastermsm.system.system (module), [1] adaptivemastermsm.system.system_lib (module), [1]

B

build_box() (adaptivemastermsm.system.system.System method), [1]

C

check_gmx() (in module adaptivemastermsm.system.system), [1]

checkfile() (in module adaptivemastermsm.launcher.launcher_lib), [1]

G

gen_input_weights() (in module adaptivemastermsm.analyzer.analyzer_lib) gen_top() (adaptivemastermsm.system.system.System method), [1]

gen_tpr() (adaptivemastermsm.launcher.launcher.Launcher method), [1] gmx_run() (adaptivemastermsm.launcher.launcher.Launcher method), [1] gmx_worker() (adaptivemastermsm.launcher.launcher.Launcher method), [1]

I

ionize() (adaptivemastermsm.system.system.System method), [1]

L

Launcher (class in adaptivemastermsm.launcher.launcher), [1]

list_duplicates_of() (in module adaptivemastermsm.analyzer.analyzer_lib)

M

map_inputs() (in module adaptivemastermsm.analyzer.analyzer_lib)

mp_run() (adaptivemastermsm.launcher.launcher.Launcher method), [1]

S

solvate() (adaptivemastermsm.system.system.System method), [1]

System (class in adaptivemastermsm.system.system), [1]

W

write_mdp_min() (in module adaptivemastermsm.launcher.launcher_lib), [1] write_mdp_npt() (in module adaptivemastermsm.launcher.launcher_lib), [1]

write_mdp_nvt() (in module adaptivemastermsm.launcher.launcher_lib), [1] write_mdp_prod() (in module adaptivemastermsm.launcher.launcher_lib), [1] write_minimization_mdp() (in module adaptivemastermsm.system.system_lib), [1]